Scott Chamberlain
Author or maintainer of the following packages:
alm
An R interface to the open source article level metrics platform
analogsea
Provides a set of functions for interacting with the 'Digital
Ocean' API at
AntWeb
A complete programmatic interface to the AntWeb database from theCalifornia Academy of Scien...
aRxiv
An interface to the API for arXiv, a repository of
electronic preprints for computer science, mathem...
binomen
Includes functions for working with taxonomic data,
including functions for combining, separating, a...
bold
A programmatic interface to the Web Service methods provided by
Bold Systems for genetic 'barcode' d...
brranching
Includes methods for fetching 'phylogenies' from a variety
of sources, currently includes 'Phylomati...
checkpoint
The goal of checkpoint is to solve the problem of package
reproducibility in R. Specifically, checkp...
chromer
A programmatic interface to the Chromosome Counts Database
(http://ccdb.tau.ac.il/). This package is...
ckanr
Client for 'CKAN' 'API' (http://ckan.org/). Includes interface
to 'CKAN' 'APIs' for search, list, sh...
cowsay
Allows printing of character strings as messages/warnings/etc.
with ASCII animals, including cats, c...
crul
A simple HTTP client, with tools for making HTTP requests,
and mocking HTTP requests. The package is...
dataone
Provides read and write access to data and metadata from
the DataONE network
discgolf
Client for the Discourse 'API'. Discourse is a open source
discussion forum platform (
dvn
Provides access to Dataverse version 3 APIs, enabling access to archived data (and metadata), and th...
ecoengine
The ecoengine provides access to more than 5 million georeferenced
specimen records from the Univers...
EGRET
Statistics and graphics for streamflow history,
water quality trends, and the statistical modeling a...
elastic
Connect to 'Elasticsearch', a 'NoSQL' database built on the 'Java'
Virtual Machine. Interacts with t...
enigma
The company 'Enigma' (https://enigma.io) holds many public 'datasets' from
governments, companies, u...
etseed
Client to interact with the 'etcd' 'key-value' data store
. Function...
fauxpas
HTTP error helpers. Methods included for general purpose HTTP
error handling, as well as individual ...
FedData
Functions to automate downloading geospatial data available from
several federated data sources (mai...
finch
Parse and create Darwin Core (
fulltext
Provides a single interface to many sources of full text
'scholarly' data, including 'Biomed Central...
gender
Encodes gender based on names and dates of birth using historical
datasets. By using these datasets ...
geoaxe
Split 'geospatial' objects into pieces. Includes
support for some spatial object inputs, 'Well-Known...
geojson
Classes for 'GeoJSON' to make working with 'GeoJSON' easier.
geojsonio
Convert data to 'geoJSON' or 'topoJSON' from various R classes,
including vectors, lists, data frame...
geojsonlint
Tools for linting 'GeoJSON'. Includes tools for interacting with the
online tool
geoknife
Processes gridded datasets found on the U.S. Geological Survey
Geo Data Portal web application or el...
getlandsat
Get Landsat 8 Data from Amazon Web Services ('AWS')
public data sets (
gistr
Work with 'GitHub' 'gists' from 'R' (e.g., http://en.wikipedia.org/
wiki/GitHub#Gist, https://help.g...
git2r
Interface to the 'libgit2' library, which is a pure C
implementation of the 'Git' core methods. Prov...
googleComputeEngineR
Interact with the Google Compute Engine API in R. Lets you create,
start and stop instances in the G...
gutenbergr
Download and process public domain works in the Project
Gutenberg collection. Includes metadata for ...
habanero
habanero
========
|pypi| |docs| |travis| |coverage|
This is a low level client for working with Cr...
highlightHTML
A tool to highlight specific cells in an HTML table or more
generally text from an HTML document. Th...
historydata
These sample data sets are intended for historians
learning R. They include population, institutiona...
httpcode
Find and explain the meaning of 'HTTP' status codes.
Functions included for searching for codes by f...
httping
A suite of functions to ping 'URLs' and to time
'HTTP' 'requests'. Designed to work with 'httr'.
internetarchive
Search the Internet Archive, retrieve metadata, and download
files.
isdparser
Tools for parsing 'NOAA' Integrated Surface Data ('ISD') files,
described at
jqr
Client for 'jq', a JSON processor (
lawn
Client for 'Turfjs' () for
'geospatial' analysis. The package revolves around usi...
mapr
Utilities for visualizing species occurrence data. Includes
functions to visualize occurrence data f...
mregions
Tools to get marine regions data from
natserv
Interface to 'NatureServe' ().
Includes methods to get data, image metad...
neotoma
Access paleoecological datasets from the Neotoma Paleoecological
Database using the published API (h...
oai
A general purpose client to work with any 'OAI-PMH'
(Open Archives Initiative Protocol for 'Metadata...
openadds
'Openaddresses' (
originr
Get species origin data (whether species is native/invasive) from the
following sources on the web: ...
paleobioDB
Includes 19 functions to wrap each endpoint of
the PaleobioDB API, plus 8 functions to visualize and...
pangaear
Tools to interact with the 'Pangaea' Database (), including functions for s...
pleiades
Provides a set of functions for interacting with the
'Pleiades' 'API', including getting status data...
plotly
Easily translate 'ggplot2' graphs to an interactive web-based version and/or create custom web-based...
prism
Allows users to access the Oregon State Prism climate data. Using the web service API data can easil...
rAltmetric
Programmatic interface to the Altmetric.com API.
rAvis
Interface to database.
It provides means to download data filtered by spec...
rbhl
Interface to 'Biodiversity' 'Heritage' Library ('BHL') 'API'
methods. 'BHL' is a repository of 'digi...
rbison
Interface to the 'USGS' 'BISON' 'API', a 'database' for
species occurrence data on the web. Data com...
rcrossref
Client for various 'CrossRef' 'APIs', including 'metadata' search
with their old and newer search 'A...
RCryptsy
Basic access to market infomation from the public API for the Crypto-Currency exchange Cryptsy.
rdryad
Interface to the API for Dryad
rebird
A programmatic client for the eBird database, including functions
for searching for bird observation...
rentrez
Provides an R interact to the NCBI's EUtils API allowing
users to search databases like genbank and ...
Reol
An R interface to the Encyclopedia of Life API. Includes functions for downloading and extracting in...
rerddap
General purpose R client for 'ERDDAP' servers. Includes
functions to search for 'datasets', get summ...
rfigshare
An interface to 'figshare' (http://figshare.com), a scientific repository to archive and assign 'DOI...
rfishbase
A programmatic interface to http://www.fishbase.org, re-written based on an accompanying 'RESTful' A...
rfisheries
A programmatic interface to openfisheries.org. This package is
part of the rOpenSci suite (http://ro...
rgauges
This package provides functions to interact with the
Gaug.es API. Gaug.es is a web analytics service...
rgbif
A programmatic interface to the Web Service methods
provided by the Global Biodiversity Information ...
rglobi
A programmatic interface to the web service methods
provided by Global Biotic Interactions (GloBI). ...
ridigbio
An interface to iDigBio's search API that allows downloading
specimen records. Searches are returned...
rinat
A programmatic interface to theAPI provided by the iNaturalist website.
rjsonapi
Consumer for APIs that Follow the JSON API Specification
(
rnbn
Access to data held by the National Biodiversity Network (NBN, www.nbn.org.uk). The NBN acts as a da...
RNeXML
Provides access to phyloinformatic data in NeXML format. The
package should add new functionality t...
rnoaa
Client for many 'NOAA' data sources including the 'NCDC'
climate 'API' at http://www.ncdc.noaa.gov/c...
rotl
An interface to the 'Open Tree of Life' API to retrieve phylogenetic
trees, information about studie...
rplos
A programmatic interface to the 'SOLR' based
search 'API' (http://api.plos.org/) provided by the Pub...
rsnps
A programmatic interface to various SNP datasets
on the web: openSNP, NBCI's dbSNP database, and Bro...
RStars
Access to the Digital Universe Data set API pulls data on
exoplants, stars, and galaxies.
rsunlight
Interface to four 'Sunlight' Foundation 'APIs'
(http://sunlightfoundation.com/api/) for government d...
rvertnet
Retrieve, map and summarize data from the 'VertNet.org' archives.
Functions allow searching by many ...
rWBclimate
This package will download model predictions from 15 different global circulation models in 20 year ...
solr
This package provides a set of functions for querying and parsingdata from Solr endpoints (l...
spocc
A programmatic interface to many species occurrence data sources,
including 'GBIF', 'USGS's' 'BISON'...
spoccutils
Utilities for use with 'spocc'. Includes functions to
clean occurrence data, find and remove duplica...
taxize
Taxonomic information from around the web. This package
interacts with a suite of web 'APIs' for tax...
traits
Species trait data from many different sources, including
sequence data from 'NCBI', plant trait dat...
treebase
Interface to the API for 'TreeBASE' (http://treebase.org)
from 'R.' 'TreeBASE' is a repository of us...
WikipediR
A wrapper for the MediaWiki API, aimed particularly at the
Wikimedia 'production' wikis, such as Wik...
worrms
Client for World Register of Marine Species
(
Impact Percentile
100
Number of Packages
94
Package Downloads
359,799
Citations
19