Learn R Programming

poppr (version 2.5.0)

Aeut: Oomycete root rot pathogen Aphanomyces euteiches AFLP data

Description

The Aeut dataset consists of 187 isolates of the Oomycete root rot pathogen, Aphanomyces euteiches collected from two different fields in NW Oregon and W Washington, USA.

Usage

data(Aeut)

Arguments

Format

a genind object with two populations containing a data frame in the other slot called population_hierarchy. This data frame gives indices of the populations and subpopulations for the data set.

References

Grunwald, NJ and Hoheisel, G.A. 2006. Hierarchical Analysis of Diversity, Selfing, and Genetic Differentiation in Populations of the Oomycete Aphanomyces euteiches. Phytopathology 96:1134-1141 doi: 10.1094/PHYTO-96-1134