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globaltest (version 5.26.0)

Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing

Description

The global test tests groups of covariates (or features) for association with a response variable. This package implements the test with diagnostic plots and multiple testing utilities, along with several functions to facilitate the use of this test for gene set testing of GO and KEGG terms.

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Version

Version

5.26.0

License

GPL (>= 2)

Maintainer

Last Published

February 15th, 2017

Functions in globaltest (5.26.0)

mlogit

Multinomial Logistic Regression
gt

Global Test
Diagnostic plots for globaltest

Global Test diagnostic plots
gt.options

Options for globaltest package
gt goodness of fit methods

Goodness of fit testing in regression models using Global Test
gt gene set testing methods

Gene set testing of gene set databases using Global Test
gt.object class

Class "gt.object" for storing the result of the function gt
Multiple testing methods of the globaltest package

Multiple testing correction for the Global Test
Comparative proportions

Comparative proportions for the Global Test