dimRed (version 0.2.3)

R_NX,dimRedResult-method: Method R_NX

Description

Calculate the R_NX score from Lee et. al. (2013) which shows the neighborhood preservation for the Kth nearest neighbors, corrected for random point distributions and scaled to range [0, 1].

Usage

# S4 method for dimRedResult
R_NX(object, ndim = getNDim(object))

Arguments

object

of class dimRedResult

ndim

the number of dimensions to take from the embedded data.

See Also

Other Quality scores for dimensionality reduction: AUC_lnK_R_NX,dimRedResult-method, LCMC,dimRedResult-method, Q_NX,dimRedResult-method, Q_global,dimRedResult-method, Q_local,dimRedResult-method, cophenetic_correlation,dimRedResult-method, distance_correlation,dimRedResult-method, mean_R_NX,dimRedResult-method, plot_R_NX, quality,dimRedResult-method, reconstruction_error,dimRedResult-method, reconstruction_rmse,dimRedResult-method, total_correlation,dimRedResult-method