SeuratCommand-class

SeuratCommand

The SeuratCommand is used for logging commands that are run on a
<code>Seurat</code> object; it stores parameters and timestamps

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

Andrew Butler

Tim Stuart

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

Yuhan Hao

SeuratCommand-class function

<dl class="dl-horizontal">
<dt><code>name</code></dt><dd>Command name</dd></dl><dt><code>time.stamp</code></dt><dd>Timestamp of when command was tun</dd><dt><code>assay.used</code></dt><dd>Optional name of assay used to generate
<code>SeuratCommand</code> object</dd><dt><code>call.string</code></dt><dd>String of the command call</dd><dt><code>params</code></dt><dd>List of parameters used in the command call</dd>

Slots

The SeuratCommand Class — SeuratCommand-class

The SeuratCommand Class

SeuratCommand-class: The SeuratCommand Class

Description

Arguments

Slots