These function constructs objects of
SolexaIntensity
and
SolexaIntensityInfo
. It will often be more
convenient to create these objects using parsers such as
readIntensities
.
SolexaIntensity(intensity=array(0, c(0, 0, 0)), measurementError=array(0, c(0, 0, 0)), readInfo=SolexaIntensityInfo( lane=integer(nrow(intensity))), ...)
SolexaIntensityInfo(lane=integer(0), tile=integer(0)[seq_along(lane)], x=integer(0)[seq_along(lane)], y=integer(0)[seq_along(lane)])
"_int.txt"
files.intensity
, but measuring standard
error. Usually derived from "_nse.txt"
files.AnnotatedDataFrame
,
containing information described by SolexaIntensityInfo
.SolexaIntensity
, or
SolexaIntensityInfo
.SolexaIntensity
.