ComplexHeatmap (version 1.10.2)

anno_barplot: Using barplot as annotation

Description

Using barplot as annotation

Usage

anno_barplot(x, baseline = "min", which = c("column", "row"), border = TRUE, bar_width = 0.6,
    gp = gpar(fill = "#CCCCCC"), ylim = NULL, axis = FALSE, axis_side = NULL,
    axis_gp = gpar(fontsize = 8), axis_direction = c("normal", "reverse"), ...)

Arguments

x

a vector of numeric values.

baseline

baseline for bars. The value should be "min" or "max", or a numeric value.

which

is the annotation a column annotation or a row annotation?

border

whether show border of the annotation compoment

bar_width

relative width of the bars, should less than one

gp

graphic parameters.

ylim

data ranges.

axis

whether add axis

axis_side

if it is placed as column annotation, value can only be "left" or "right". If it is placed as row annotation, value can only be "bottom" or "top".

axis_gp

graphic parameters for axis

axis_direction

if the annotation is row annotation, should the axis be from left to right (default) or follow the reversed direction?

...

for future use.

Value

• A graphic function which can be set in HeatmapAnnotation constructor method.

Examples

f = anno_barplot(rnorm(10))
grid.newpage(); f(1:10)

f = anno_barplot(rnorm(10), which = "row")
grid.newpage(); f(1:10)