FGNet (version 3.6.2)

clustersDistance: Plots distances between metagroups.

Description

Plots the distances between metagroups taking into account the number of common genes.

Usage

clustersDistance(incidenceMatices, mgCols = NULL, clustMethod="average")

Arguments

incidenceMatices

Object returned by fea2incidMat().

mgCols

Colors for the metagroups.

clustMethod

Clustering method. Character string (i.e. "single", "complete", "average") for function hclust() (argument 'method').

Value

Plot and distance matrix.

See Also

Full description of the package: FGNet

Examples

results <- fea_gtLinker_getResults(jobID=1963186, jobName="gtLinker_example")
incidMatrices <- fea2incidMat(results)
clustersDistance(incidMatrices)