create_jaatha_data

create_jaatha_data.default

The data to be analysed with Jaatha. 
It should be in a format identical to the 
simulation results (see <code><a href="/link/create_jaatha_model?package=jaatha&version=3.0.0" rd-options="" data-mini-rdoc="jaatha::create_jaatha_model">create_jaatha_model</a></code>).

data

The jaatha model, see <code><a href="/link/create_jaatha_model?package=jaatha&version=3.0.0" rd-options="" data-mini-rdoc="jaatha::create_jaatha_model">create_jaatha_model</a></code>.

model

By default, this function assumes that the observed data is in a format 
identical to the format of the simulation results, before the summary
statistics are calculated.

An estimation method that can use computer simulations to
    approximate maximum-likelihood estimates even when the likelihood function can not
    be evaluated directly. It can be applied whenever it is feasible to conduct many
    simulations, but works best when the data is approximately Poisson distributed.
    It was originally designed for demographic inference in evolutionary
    biology. It has optional support for conducting coalescent simulation using
    the 'coala' package.

Paul Staab

jaatha

Simulation-Based Maximum Likelihood Parameter Estimation

create_jaatha_data function

<ul><li><code>default</code>: The data's format is identicial to the 
simulated data.</li></ul>

Methods (by class)

When used with <pkg>coala</pkg>, <code>coala::calc_sumstats_from_data()</code> should
create output that is compatible with this function.

create_jaatha_data: Prepare the observed data for Jaatha

Description

Usage

Arguments

Methods (by class)

Demographic Inference