dropEmptyImageDimensions

drop_empty_dim

Value to check against.  If zero, then 
<code>dropEmptyImageDimensions</code> will drop any dimension that has 
fewer than <code>threshold</code> zeroes.  May be a vector of values, matched with 
<code><a rd-options="" href="/link/match?package=fslr&version=1.9.2.1" data-mini-rdoc="fslr::match">match</a></code>

value

Drop dimension if fewer than <code>threshold</code> voxels
are in the slice

threshold

List of other nifti objects or filenames 
to apply the same dropping as <code>img</code>.

other.imgs

keep indices in output.  Will return list, even if 
<code>other.imgs</code> not specified

keep_ind

Should image be reoriented if a filename?

reorient


Drops dimensions of an image that has all irrelevant
values


Wrapper functions that interface with 'FSL' (http://
fsl.fmrib.ox.ac.uk/fsl/fslwiki/), a powerful and commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with 'FSL'
completely in R, where you pass R objects of class 'nifti', implemented by
package 'oro.nifti', and the function executes an 'FSL' command and returns an R
object of class 'nifti' if desired.

John Muschelli

fslr

Wrapper Functions for FSL ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')

dropEmptyImageDimensions function

Value to check against.  If zero, then 
<code>dropEmptyImageDimensions</code> will drop any dimension that has 
fewer than <code>threshold</code> zeroes.  May be a vector of values, matched with 
<code><a rd-options='' href='match'>match</a></code>

dropEmptyImageDimensions: Drop Empty Image Dimensions

Description

Usage

Arguments

Value

See Also