seqinr (version 3.1-2)

gb2fasta: conversion of GenBank file into fasta file

Description

Converts a single entry in GenBank format into a fasta file.

Usage

gb2fasta(source.file =
"ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Acinetobacter_ADP1_uid61597/NC_005966.gbk",
destination.file = "Acinetobacter_ADP1_uid61597.fasta")

Arguments

source.file

GenBank file

destination.file

Fasta file

Value

• none

Details

Multiple entries in GenBank file are not supported.

References

citation("seqinr")

See Also

oriloc

Examples

gb2fasta() # need internet connection