get_bootstrap_summary

a <code>sleuth</code> object such that <code>extra_bootstrap_summary = TRUE</code> inside of <code><a rd-options="" href="/link/sleuth_prep?package=sleuth&version=0.29.0" data-mini-rdoc="sleuth::sleuth_prep">sleuth_prep</a></code>.

a character vector of length 1 indicating the target_id (transcript or gene name depending on aggregation mode)

target_id

a character vector of either 'est_counts' or 'tpm' (also requires <code>extra_bootstrap_summary = TRUE</code> in <code><a rd-options="" href="/link/sleuth_prep?package=sleuth&version=0.29.0" data-mini-rdoc="sleuth::sleuth_prep">sleuth_prep</a></code>)

units

Extract the bootstrap summary from a sleuth object that has been initialized in sleuth_prep.

Investigate transcript abundance from "kallisto" and differential
expression analysis from RNA-Seq data.

Harold Pimentel

sleuth

Tools for investigating RNA-Seq

get_bootstrap_summary function

a <code>sleuth</code> object such that <code>extra_bootstrap_summary = TRUE</code> inside of <code><a rd-options='' href='sleuth_prep'>sleuth_prep</a></code>.

a character vector of either 'est_counts' or 'tpm' (also requires <code>extra_bootstrap_summary = TRUE</code> in <code><a rd-options='' href='sleuth_prep'>sleuth_prep</a></code>)

get_bootstrap_summary: bootstrap summary

Description

Usage

Arguments

Value