init.orderings.vs.pseudotimes.plot

<p>Which sample to take pseudotimes from</p>

sample.iter

<p>Plot the orderings for initialisation against the estimated pseudotime.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

init.orderings.vs.pseudotimes.plot: Plot the orderings for initialisation against the estimated pseudotime.

Description

Usage

Arguments