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ClassComparison (version 3.3.5)

Classes and Methods for "Class Comparison" Problems on Microarrays

Description

Defines the classes used for "class comparison" problems in the OOMPA project (). Class comparison includes tests for differential expression; see Simon's book for details on typical problem types.

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Install

install.packages('ClassComparison')

Monthly Downloads

313

Version

3.3.5

License

Apache License (== 2.0)

Maintainer

Kevin Coombes

Last Published

February 5th, 2025

Functions in ClassComparison (3.3.5)

significant

Generic Methods for Significance
rankSum

Wilcoxon Rank-Sum Statistic
BumSummary-class

Class "BumSummary"
variantT

Classes for Variant T-tests
Dudoit-class

Class "Dudoit"
MultiTtest-class

Class "MultiTtest"
Bum-class

Class "Bum"
MultiWilcoxonTest-class

Class "MultiWilcoxonTest"
SingleGroup-class

Class "SingleGroup"
TNoM-class

Classes "TNoM" and "fullTNoM"
SamSummary-class

Class "SamSummary"
TNoMSummary-class

Class "TNoMSummary"
Sam-class

Class "Sam"
TwoGroupStats-class

Class "TwoGroupStats"
SmoothTtest-class

Class "SmoothTtest"
MultiLinearModel-class

Class "MultiLinearModel"
dwil

Wilcoxon Density Function