oligo (version 1.36.1)

list.celfiles: List CEL files.

Description

Function used to get a list of CEL files.

Usage

list.celfiles(..., listGzipped=FALSE)

Arguments

...

Passed to list.files

listGzipped

Logical. List .CEL.gz files?

Value

• Character vector with filenames.

See Also

list.files

Examples

if (require(hapmapsnp5)){
  path <- system.file("celFiles", package="hapmapsnp5")

  ## only the filenames
  list.celfiles(path)

  ## the filenames with full path...
  ## very useful when genotyping samples not in the working directory
  list.celfiles(path, full.names=TRUE)
}else{
  ## this won't return anything
  ## if in the working directory there isn't any CEL
  list.celfiles(getwd())
}