mni_fname

Resolution (in mm) of the brain image (isotropic)

Should the brain be returned (default) or the T1 with the skull

brain

Should the linearized MNI template be used

linear

should the mask be given?  Generally, only
MNI152_T1_1mm_brain_mask exists.

mask


Finds the standard data directory for FSL and pastes togehter
the string for an MNI template image


Wrapper functions that interface with 'FSL' (http://
fsl.fmrib.ox.ac.uk/fsl/fslwiki/), a powerful and commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with 'FSL'
completely in R, where you pass R objects of class 'nifti', implemented by
package 'oro.nifti', and the function executes an 'FSL' command and returns an R
object of class 'nifti' if desired.

mni_fname: Construct MNI Filename

Description

Usage

Arguments

Value