monoSpline

 the new values to be transformed. If not provided, "x" will be used. 

newX

 parameter used by function smoothCon in package mgcv 

nKnots

 determine whether to plot intermediate results 

ifPlot

 methods 

The lumi package provides an integrated solution for the Illumina microarray data analysis. It includes functions of Illumina BeadStudio (GenomeStudio) data input, quality control, BeadArray-specific variance stabilization, normalization and gene annotation at the probe level. It also includes the functions of processing Illumina methylation microarrays, especially Illumina Infinium methylation microarrays.

Pan Du

lumi

BeadArray Specific Methods for Illumina Methylation and Expression Microarrays

monoSpline function

the new values to be transformed. If not provided, "x" will be used.

parameter used by function smoothCon in package mgcv

determine whether to plot intermediate results

monoSpline: Fitting a curve with monotonic spline

Description

Usage

Arguments

Value

Details

See Also