Usage
odm.control(pair.cre = 1, dist.mthd = "median", Lower = .25, Upper = .75, trans = "log2", centering = TRUE, projection.type = "PCA", lbda = 1, nonlin.method = "L-BFGS-B", nonlin.SS = "AsymOff", nonlin.Frank = c(2, -8, 0, 1), ncl = 2, alpha = 0.05 )
Arguments
pair.cre
a scalar parameter to specify the minimum number of pairs, used in "type = pair".
dist.mthd
a distance parameter used in "type = diff". you can choose one of "median", "mean" or and so on.
Lower
a criterion for lower quantile value used to construct boxplot
Upper
a criterion for upper quantile value used to construct boxplot
trans
a parameter for a logarithm and exponential transformation. If a log 2 transformation is needed, set "trans = log2". If no transformation is needed, set "trans = FALSE".
centering
a logical parameter for the status of centering. If "centering = TRUE", data are centered by its column means.
projection.type
a parameter to determine a type of projection methods. Choose one of "naive", "pca", and "robust".
lbda
a criterion about lambda used for nonlinear quantile regression.
nonlin.method
a parameter to determine a type of methods used for nonlinear quantile regression. choose one of "L-BFGS-B" and "BFGS". Default is "L-BFGS-B".
nonlin.SS
a parameter to determine a type of structure used for nonlinear quantile regression. choose one of "Frank", "Self", "Asym" and "AsymOff". Default is "AsymOff", Asymptotic Regression Model with an Offset.
nonlin.Frank
a structure parameter used for Frank copula model. Gain c(df, delta, mu, sigma) in the Frank copula formula
ncl
A parameter to determine the number of cores used in parallel computing. A default value is 2.
alpha
A sigfinicance level of the Grubbs test. A default value is 0.05.