pDisRes-class: Primary dis-regulation (pDis) result class
Description
This class is used to encode the results of the pathway analysis performed by the function pDis.
Slots
pathways:- A list of
pDisPathway-class objects. input:- named vector of fold changes used for the analysis. The names of the vector are the IDs originaly used.
ref:- character vector containing the IDs used as reference in the analysis.
cutOffFree:- boolean value indicating if a cut-of-free analysis has been performed.
Details
The slots input and ref record global information related to the whole analysis,
while the pathways slot records the specific results as pDisPathway-class for each one of the pathways used in the analysis.