pdb2sse: Obtain An SSE Sequence Vector From A PDB Object
Description
Results are similar to that returned by stride(pdb)$sse and dssp(pdb)$sse.
Usage
pdb2sse(pdb, verbose = TRUE)
Arguments
pdb
an object of class pdb as obtained from
function read.pdb.
verbose
logical, if TRUE warnings and other messages will be printed.
Value
a character vector indicating SSE elements for each amino acide residue.
The 'names' attribute of the vector contains 'resno', 'chain', 'insert', and
'SSE segment number', seperated by the character '_'.