Learn R Programming

beadarraySNP (version 1.38.0)

pdfQC: QCreport

Description

Create PDF file with experimental quality control plots

Usage

pdfQC(object, filename = "arrayQC.pdf", by = 10)

Arguments

object
QCIllumina object, or list of QCIllumina objects
filename
character, output pdf filename
by
number of samples in barplot, see reportSamplePanelQC

Value

A PDF file is produced

Details

This function creates a pdf file with QC information. The first page contains 8 plotQC panels showing the spatial distribution of intensities on a SAM plate. The following page(s) contain the output of reportSamplePanelQC

See Also

plotQC, reportSamplePanelQC, QCIllumina-class