Learn R Programming

oce (version 0.9-20)

plot,lobo-method: Plot LOBO data

Description

Plot a summary diagram for lobo data.

Usage

"plot"(x, which = c(1, 2, 3), adorn = NULL, mgp = getOption("oceMgp"), mar = c(mgp[2] + 1, mgp[1] + 1, 1, mgp[1] + 1.25), debug = getOption("oceDebug"), ...)

Arguments

x
A lobo object, e.g. as read by read.lobo.
which
A vector of numbers or character strings, indicating the quantities to plot. These are stacked in a single column. The possible values for which are as follows: 1 or "temperature" for a time series of temperature; 2 or "salinity" for salinity; 3 or "TS" for a TS diagram; 4 or "u" for a timeseries of the u component of velocity; 5 or "v" for a timeseries of the v component of velocity; 6 or "nitrate" for a timeseries of nitrate concentration; 7 or "fluorescence" for a timeseries of fluorescence value.
adorn
(Defunct) An expression or vector of expressions that contain R code that is to be executed immediately after each panel of the plot. If the number of expressions matches the number of panels, then the expressions are used for the corresponding panels; otherwise, the expression list is extended to match the number of panels (i.e. to obtain length(which) elements). Note that adorn is a dangerous argument, because if the expressions contained therein set up local storage, there is a chance of entirely disrupting the plotting. For this reason, adorn was marked as defunct in June 2016, and will be removed entirely after the July CRAN release. Users with existing code that uses adorn should simply plot the panels individually, and use conventional R functions, e.g. lines etc., after each panel, to achieve the desired effect. (See oce-defunct for notes on other deprecated or defunct oce features.)
mgp
3-element numerical vector to use for par(mgp), and also for par(mar), computed from this. The default is tighter than the R default, in order to use more space for the data and less for the axes.
mar
value to be used with par("mar").
debug
an integer specifying whether debugging information is to be printed during the processing. This is a general parameter that is used by many oce functions. Generally, setting debug=0 turns off the printing, while higher values suggest that more information be printed.
...
optional arguments passed to plotting functions.

See Also

Other functions that plot oce data: plot,adp-method, plot,adv-method, plot,amsr-method, plot,argo-method, plot,bremen-method, plot,cm-method, plot,coastline-method, plot,ctd-method, plot,gps-method, plot,ladp-method, plot,lisst-method, plot,met-method, plot,odf-method, plot,rsk-method, plot,satellite-method, plot,sealevel-method, plot,section-method, plot,tidem-method, plot,topo-method, plot,windrose-method, plotProfile, plotScan, plotTS, tidem-class

Other things related to lobo data: [[,lobo-method, [[<-,lobo-method, as.lobo, lobo-class, lobo, subset,lobo-method, summary,lobo-method