Functions that have been superceed, were never documented, or will be removed from the package for other reasons
ergm.Cprepare.el
has been replaced by to_ergm_Cdouble.matrix()
ergm.Cprepare.miss
has been deprecated in favor of to_ergm_Cdouble(is.na(nw))
or the rlebdm
-based representations.
print.gofobject()
is a deprecated alias for print.gof()
.
summary.gof()
is a deprecated alias for print.gof()
.
summary.gofobject()
is a deprecated alias for print.gof()
.
plot.gofobject()
is a deprecated alias for plot.gof()
.
plot.mcmc.list.ergm
is the obsolete name for ergm_plot.mcmc.list()
.
coef.length.model()
has been replaced by the generic nparam()
.
plot.ergm
: deprecated alias for mcmc.diagnostics()
.
Use latentnet::plot.ergmm()
instead.
summary.statistics()
is a deprecated name of summary_formula()
.
colMeans.mcmc.list(...)sweep.mcmc.list(...)
get.miss.dyads(constraints, constraints.obs)
InitErgmTerm.degreepopularity(nw, arglist, ...)
InitErgmTerm.idegreepopularity(nw, arglist, ...)
InitErgmTerm.odegreepopularity(nw, arglist, ...)
ergm.Cprepare.el(x, attrname = NULL, prototype = NULL)
ergm.checkargs(fname, arglist, varnames = NULL, vartypes = NULL,
defaultvalues = list(), required = NULL)
ergm.checkbipartite(fname, nw.bipartiteflag, requirement,
extramessage = "")
ergm.checkdirected(fname, nw.directedflag, requirement,
extramessage = "")
ergm.Cprepare.miss(nw)
ergm.getMCMCsample(nw, model, proposal, eta0, control, verbose = FALSE,
response = NULL, update.nws = TRUE, ...)
ergm.mcmcslave(Clist, proposal, eta0, control, verbose, ...,
prev.run = NULL, burnin = NULL, samplesize = NULL,
interval = NULL, maxedges = NULL)
ergm.getterms(formula)
ergm.getmodel(object, ...)
ergm.MHP.table(...)
MHproposal(...)
MHproposal.character(...)
MHproposal.ergm(...)
MHproposal.formula(...)
ergm.init.methods(...)
ergm.ConstraintImplications(...)
ergm.update.formula(object, new, ..., from.new = FALSE)
remove.offset.formula(object, response = NULL)
offset.info.formula(object, response = NULL, ...)
# S3 method for gofobject
print(x, ...)
# S3 method for gof
summary(object, ...)
# S3 method for gofobject
summary(object, ...)
# S3 method for gofobject
plot(x, ...)
# S3 method for mcmc.list.ergm
plot(...)
# S3 method for length.model
coef(...)
# S3 method for ergm
plot(x, ...)
# S3 method for network.ergm
plot(x, attrname = NULL,
label = network.vertex.names(x), coord = NULL, jitter = TRUE,
thresh = 0, usearrows = TRUE, mode = "fruchtermanreingold",
displayisolates = TRUE, interactive = FALSE, xlab = NULL,
ylab = NULL, xlim = NULL, ylim = NULL, pad = 0.2,
label.pad = 0.5, displaylabels = FALSE, boxed.labels = TRUE,
label.pos = 0, label.bg = "white", vertex.sides = 8,
vertex.rot = 0, arrowhead.cex = 1, label.cex = 1, loop.cex = 1,
vertex.cex = 1, edge.col = 1, label.col = 1, vertex.col = 2,
label.border = 1, vertex.border = 1, edge.lty = 1,
label.lty = NULL, vertex.lty = 1, edge.lwd = 0,
label.lwd = par("lwd"), edge.len = 0.5, edge.curve = 0.1,
edge.steps = 50, loop.steps = 20, object.scale = 0.01,
uselen = FALSE, usecurve = FALSE, suppress.axes = TRUE,
vertices.last = TRUE, new = TRUE, layout.par = NULL,
cex.main = par("cex.main"), cex.sub = par("cex.sub"), seed = NULL,
latent.control = list(maxit = 500, trace = 0, dyadsample = 10000,
penalty.sigma = c(5, 0.5), nsubsample = 200), colornames = "rainbow",
verbose = FALSE, latent = FALSE, ...)
ergm.getglobalstats(nw, m, response = NULL)
summary.statistics(object, ...)
# S3 method for statistics.formula
summary(object, ...)
# S3 method for statistics.network
summary(object, ...)
Arguments to deprecated functions.
InitErgmTerm.degreepopularity
: Use degree1.5
instead.
InitErgmTerm.idegreepopularity
: Use idegree1.5
instead.
InitErgmTerm.odegreepopularity
: Use odegree1.5
instead.
ergm.checkargs
: Use check.ErgmTerm()
instead.
ergm.checkbipartite
: Use check.ErgmTerm()
instead.
ergm.checkdirected
: Use check.ErgmTerm()
instead.
ergm.getMCMCsample
: Use ergm_MCMC_sample()
instead.
ergm.mcmcslave
: Use ergm_MCMC_slave()
instead.
ergm.getterms
: Use statnet.common::list_rhs.formula()
and statnet.common::eval_lhs.formula()
instead.
ergm.getmodel
: Use ergm_model
instead.
ergm.MHP.table
: Deprecated name for ergm_proposal_table()
.
MHproposal
: Deprecated name of ergm_proposal()
.
MHproposal.character
: Deprecated name of ergm_proposal()
.
MHproposal.ergm
: Deprecated name of ergm_proposal()
.
MHproposal.formula
: Deprecated name of ergm_proposal()
.
ergm.init.methods
: Deprecated: specify in the InitErgmReference.*
implementation.
ergm.ConstraintImplications
: Deprecated: specify in the InitErgmConstraint.*
implementation.
ergm.update.formula
: Use nonsimp_update.formula
instead.
remove.offset.formula
: Use statnet.common::filter_rhs.formula()
such as statnet.common::filter_rhs.formula(object, function(x) (if(is.call(x)) x[[1]] else x)!="offset")
instead.
offset.info.formula
: offset.info.formula
returns the offset
vectors associated with a formula.
ergm.getglobalstats
: Use summary.ergm_model()
instead.