plotGene

plotGene,INSPEcT-method

object

Eiher a rowname or a row number to select one single gene

A logical, indicating whether the limits for y-axis of degradation and processing rates should be fixed
relative to their distributions

fix.yaxis


Plot the pre-modeled and modeled profiles for one gene<p></p><p>A method to see the shapes of the estimated synthesis, degradation and processing rates, pre-mRNA and total mRNA 
concentrations (solid thin lines) their variances (dashed lines) and the modeled rates and concentrations 
(ticker solid line) of a single gene.
</p>

INSPEcT (INference of Synthesis, Processing and
dEgradation rates in Time-Course experiments) analyses 4sU-seq
and RNA-seq time-course data in order to evaluate synthesis,
processing and degradation rates and asses via modeling the
rates that determines changes in mature mRNA levels.

Stefano de Pretis

INSPEcT

Analysis of 4sU-seq and RNA-seq time-course data

plotGene function

Plot the pre-modeled and modeled profiles for one gene

A method to see the shapes of the estimated synthesis, degradation and processing rates, pre-mRNA and total mRNA 
concentrations (solid thin lines) their variances (dashed lines) and the modeled rates and concentrations 
(ticker solid line) of a single gene.

plotGene: Plot the pre-modeled and modeled profiles for one gene

Description

Usage

Arguments

Value

Examples