plotMSlist

An MSlist returned by <code><a rd-options="enviPick" href="/link/readMSdata?package=enviPick&version=1.5&to=enviPick" data-mini-rdoc="enviPick::readMSdata">readMSdata</a></code>, <code><a rd-options="enviPick" href="/link/mzpart?package=enviPick&version=1.5&to=enviPick" data-mini-rdoc="enviPick::mzpart">mzpart</a></code>, <code><a rd-options="enviPick" href="/link/mzclust?package=enviPick&version=1.5&to=enviPick" data-mini-rdoc="enviPick::mzclust">mzclust</a></code> or <code><a rd-options="enviPick" href="/link/mzpick?package=enviPick&version=1.5&to=enviPick" data-mini-rdoc="enviPick::mzpick">mzpick</a></code>

MSlist

Initialize plot: two-element vector of lower and upper RT plot limits. Set to FALSE to view full data.

RTlimit

Initialize plot: two-element vector of lower and upper m/z limits. Set to FALSE to view full data.

mzlimit

shiny

Size of m/z bar (in ppm) shown at large zoom

ppmbar


View your centroided LC-HRMS data and partitioning / clustering / peak-picking results. 
Monitor what peak-picking produces and if it fails; get a grip on optimal parameter settings from comparison with underlying raw data.


Sequential partitioning, clustering and peak detection of
centroided LC-MS mass spectrometry data (.mzXML). Interactive result and raw
data plot.

Martin Loos

enviPick

Peak Picking for High Resolution Mass Spectrometry Data

plotMSlist function

An MSlist returned by <code><a rd-options='enviPick' href='readMSdata'>readMSdata</a></code>, <code><a rd-options='enviPick' href='mzpart'>mzpart</a></code>, <code><a rd-options='enviPick' href='mzclust'>mzclust</a></code> or <code><a rd-options='enviPick' href='mzpick'>mzpick</a></code>

plotMSlist: Interactive raw data and result viewer

Description

Usage

Arguments

Details

See Also