pheno2geno (version 1.4.0)

plotMapComparison: Plotting routine for comparison of two genetic maps.

Description

Plotting routine for comparison of two genetic maps.

Usage

plotMapComparison(cross, population, map=c("genetic","physical"), chr)

Arguments

cross

An object of class cross. See read.cross for details.

population

An object of class population. See create.population for details.

map

Which map (from ones stored in population$maps) should be used fo assigning chromosomes on the created map.

chr

Specifies subset of chromosomes to be shown.

Value

None.

See Also

• markersCorPlot - Plotting correlation between two maps together with markers placement (comparison of coverage).

• projectOldMarkers - Plotting routine for showing how markers from original map are placed on saturated map.

• cross.saturate - Saturate existing map.

• cross.denovo - Create de novo genetic map or chromosome assignment vector.

Examples

# NOT RUN {
	data(testPopulation)
	data(testCross)
	plotMapComparison(testCross,testPopulation,map="genetic")
# }