plotProfilesWithinBicluster

expression matrix (of class 'matrix') for the subset of genes and samples corresponding to the bicluster under study

main

names of the samples to be used for annotating the x axis (character vector
		of length equal to the number of columns of the expression matrix 'x' (representing the bicluster)

sampleNames

names of the genes to be plotted in a legend (character vector of length equal
 to the number of rows of the expression matrix 'x'); only suitable for biclusters containing a
 small number of genes

geneNames

Plot Gene Expression Profiles within a (Core) Bicluster

Biclusters are submatrices in the data matrix which
satisfy certain conditions of homogeneity. Package contains
functions for generating robust biclusters with respect to the
initialization parameters for a given bicluster solution
contained in a bicluster set in data, the procedure is also
known as ensemble biclustering. The set of biclusters is
evaluated based on the similarity of its elements (the
overlap), and afterwards the hierarchical tree is constructed
to obtain cut-off points for the classes of robust biclusters.
The result is a number of robust (or super) biclusters with
none or low overlap.

plotProfilesWithinBicluster: Plot Gene Expression Profiles within a (Core) Bicluster

Description

Usage

Arguments

Value

See Also