plotSpec

plotSpec,xcmsRaw-method

object

logical, use mouse to identify and label peaks

ident

numeric vector with locations of vertical lines

vline

arguments passed to <code><a rd-options="" href="/link/profRange?package=xcms&version=1.48.0" data-mini-rdoc="xcms::profRange">profRange</a></code>


  Uses the pre-generated profile mode matrix to plot mass spectra
  over a specified retention time range.


methods

hplot

iplot

plotSpec-methods

Framework for processing and visualization of
chromatographically separated and single-spectra mass spectral data. Imports from
AIA/ANDI NetCDF, mzXML, mzData and mzML files. Preprocesses data for
high-throughput, untargeted analyte profiling.

Steffen Neumann

xcms

LC/MS and GC/MS Data Analysis

plotSpec-methods function

<dl>
<dt>object = "xcmsRaw"</dt><dd>
  <code>plotSpec(object, ident = FALSE, vline = numeric(0), ...)</code>
</dd> </dl>

Methods

arguments passed to <code><a rd-options='' href='profRange'>profRange</a></code>

plotSpec-methods: Plot mass spectra from the profile matrix

Description

Arguments

Value

Methods

See Also