metagenomeSeq (version 1.14.0)

plotTimeSeries: Plot difference function for particular bacteria

Description

Plot the difference in abundance for significant features.

Usage

plotTimeSeries(res, C = 0, xlab = "Time", ylab = "Difference in abundance", main = "SS difference function prediction", ...)

Arguments

res

Output of fitTimeSeries function

C

Value for which difference function has to be larger or smaller than (default 0).

xlab

X-label.

ylab

Y-label.

main

Main label.

...

Extra plotting arguments.

Value

Plot of difference in abundance for significant features.

See Also

fitTimeSeries

Examples

data(mouseData)
res = fitTimeSeries(obj=mouseData,feature="Actinobacteria",
   class="status",id="mouseID",time="relativeTime",lvl='class',B=10)
plotTimeSeries(res)