flowCore (version 1.38.2)

quadraticTransform: Create the definition of a quadratic transformation function to be applied on a data set

Description

Create the definition of the quadratic Transformation that will be applied on some parameter via the transform method. The definition of this function is currently x <- a*x\^2 + b*x + c

Usage

quadraticTransform(transformationId="defaultQuadraticTransform", a = 1, b = 1, c = 0)

Arguments

transformationId

character string to identify the transformation

a

double that corresponds to the quadratic coefficient in the equation

b

double that corresponds to the linear coefficient in the equation

c

double that corresponds to the intercept in the equation

Value

Returns an object of class transform.

See Also

transform-class, transform

Examples

samp <- read.FCS(system.file("extdata",
   "0877408774.B08", package="flowCore"))
  quadTrans <- quadraticTransform(transformationId="Quadratic-transformation", a=1, b=1, c=0)
  dataTransform <- transform(samp, transformList('FSC-H', quadTrans))