Reads REDF (Raw Exchange Digital PCR format) data.
read_redf(input, ext = NULL)
name of the input file (character
) or input object
(data.frame
).
extension of the file ().
An object of '>adpcr
or '>dpcr
type,
depends on the value of adpcr
parameter.
REDF (Raw Exchange Digital PCR format) data is preferably a .csv file with following columns:
names of experiments
indices of replicates
names of assays
number of positive partitions
total number of partitions
volume of partition (nL)
uncertainty of partition's volume (nL)
partitions with k
equal or higher than threshold are
treated as positve.
indices of panels
Column panel_id
should be specified only in case of
array-based dPCR.