biomod2 (version 4.2-5)

biomod2-deprecated: Deprecated functions in package biomod2.

Description

The functions listed below are deprecated and were removed in the current version. When possible, alternative functions with similar functionality are mentioned. Help pages for deprecated functions are available at help("<function>-deprecated").

Usage

BIOMOD_CrossValidation(...)
BIOMOD_PresenceOnly(...)
BIOMOD_Tuning(...)
BinaryTransformation(...)
calculate.stat(...)
Find.Optim.Stat(...)
getStatOptimValue(...)
makeFormula(...)
models_scores_graph(...)
ProbDensFunc(...)
response.plot2(...)
sample.factor.levels(...)
sre(...)
.transform.outputs.list(...)
variables_importance(...)

<code>BIOMOD_CrossValidation</code>

For BIOMOD_CrossValidation use bm_CrossValidation.

<code>BIOMOD_PresenceOnly</code>

For BIOMOD_PresenceOnly use bm_FindOptimStat.

<code>BIOMOD_Tuning</code>

For BIOMOD_Tuning use bm_Tuning.

<code>BinaryTransformation</code>

For BinaryTransformation use bm_BinaryTransformation.

<code>calculate.stat</code>

For calculate.stat use bm_CalculateStat.

<code>Find.Optim.Stat</code>

For Find.Optim.Stat use bm_FindOptimStat.

<code>getStatOptimValue</code>

For getStatOptimValue use get_optim_value.

<code>makeFormula</code>

For makeFormula use bm_MakeFormula.

<code>models_scores_graph</code>

For models_scores_graph use bm_PlotEvalMean.

<code>ProbDensFunc</code>

For ProbDensFunc use bm_PlotRangeSize.

<code>response.plot2</code>

For response.plot2 use bm_PlotResponseCurves.

<code>sample.factor.levels</code>

For sample.factor.levels use bm_SampleFactorLevels.

<code>sre</code>

For sre use bm_SRE.

<code>.transform.outputs.list</code>

For .transform.outputs.list use .transform_outputs_list.

<code>variables_importance</code>

For variables_importance use bm_VariablesImportance.