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sensiPhy (version 0.8.4)

sensi_plot.influ.physig: Graphical diagnostics for class 'influ.physig'

Description

sensi_plot.influ_physig Plot results from influ_physig

Usage

# S3 method for influ.physig
sensi_plot(x, graphs = "all", ...)

Arguments

x

output from influ_physig

graphs

choose which graph should be printed on the output ("all", 1, 2)

...

further arguments to methods.

Details

For 'x' from influ_physig:

Graph 1: Distribution of estimated phylogenetic signal (K or lambda) for each simulation (leave-one-out deletion). Dashed red vertical line represents the original estimate of phylogenetic signal with the full data (with all species).

Graph 2: Distribution of P values for the phylogenetic signal (K or lambda) for each simulation (leave-one-out deletion). Red vertical line represents the alpha significance level = 0.05.

See Also

ggplot, phylosig