beadarraySNP (version 1.38.0)

setRealCN: Integrate state information into SNP object

Description

Set calculated values of copy numbers in inferred element of AssayData slot

Usage

setRealCN(object, sample, cn.sum, subsample="OPA")

Arguments

object

class SnpSetIllumina

sample

sample identifier

cn.sum

list, see createCNSummary

subsample

"OPA"

Value

SnpSetIllumina object with inferred element of AssayData slot set

See Also

segmentate, alterCN, plotGoldenGate4OPA createCNSummary