Computes specificity matrix for biclusters in two bicluster sets
specificityMat(x, y, type=c("rows", "cols", "both"))BiclustSet object containing row and column indicators of bicluster membership, number of biclusters
BiclustSet object containing row and column indicators of bicluster membership, number of biclusters
whether to compute specificity in two dimensions, row dimension or column dimension
matrix of pairwise specificities
This function operates on BiclustSet objects and computes pairwise similarity based on the common elements between biclusters. Sensitivity inclusion score \(spe\) of biclusters A and B is computed as $$spe=\frac{|A\cap B|}{|B|}$$
similarity,jaccardMat, ochiaiMat, kulczynskiMat,
sensitivityMat,sorensenMat