tsv_to_kinpair

file

character. kin category to assign or extract from data. one of PO, FS, HS, AV, GG, HAV, GGG, 1C, 1C1, 2C, GAV, HGAV, H1C , H1C1 or H2C

kinship

character. lifestage to assign or extract from data. one of 'unknown', 'immature' or 'ovipositional'.

lifestage

additional arguments to pass to <code>read_tsv</code>

This function is part of suite of functions handling file import/export for kinship dispersal objects.<code>.csv</code> &amp; <code>.tsv</code> reading functions at minimum require the .delim file to contain a column titled 'distance' containing distances
between kin pairs. It can optionally contain a column of kinship values 'kinship' as well as a column of lifestage values 'lifestage'.
If the file contains more than one value in the kinship or lifestage columns (e.g. bot 'FS' and 'HS') - the corresponding function
parameter must be set to pick a corresponding subset of dispersed pairs. where parameters are set in the absence of file columns,
these values are assigned to the returned <code>KinPairData</code> object.

Functions for simulating and estimating kinship-related dispersal. Based
on the methods described in M. Jasper, T.L. Schmidt., N.W. Ahmad, S.P. Sinkins & A.A.
Hoffmann (2019) <doi:10.1111/1755-0998.13043> "A genomic approach to inferring kinship
reveals limited intergenerational dispersal in the yellow fever mosquito".
Assumes an additive variance model of dispersal in two dimensions, compatible with
Wright's neighbourhood area. Simple and composite dispersal simulations are supplied,
as well as the functions needed to estimate parent-offspring dispersal for simulated or
empirical data, and to undertake sampling design for future field studies of dispersal.
For ease of use an integrated Shiny app is also included.

tsv_to_kinpair: Reads `.tsv` and converts to `KinPairData` object

Description

Usage

Arguments

Value

See Also