maftools (version 0.99.30)

write.mafSummary: Writes maf summaries to an output tab-delimited text file.

Description

Writes maf summaries to an output tab-delimited text file.

Usage

write.mafSummary(maf, basename = NULL)

Arguments

maf

an MAF object generated by read.maf

basename

basename for output file to be written.

Value

None. Writes output as text files.

See Also

read.maf

Examples

# NOT RUN {
laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf, removeSilent = TRUE, useAll = FALSE)
write.mafSummary(maf = laml, basename = 'laml')

# }