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clValid (version 0.6-6)
Validation of Clustering Results
Description
Statistical and biological validation of clustering results.
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Install
install.packages('clValid')
Monthly Downloads
1,700
Version
0.6-6
License
LGPL-3
Maintainer
ORPHANED
Last Published
March 25th, 2014
Functions in clValid (0.6-6)
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clValid
Validate Cluster Results
annotationListToMatrix
Change annotation list to matrix
BSI
Biological Stability Index
print.sota
Print Function for a SOTA Object
readAnnotationFile
Read in biological annotation files from external file
clValid-class
Class "clValid"
connectivity
Connectivity Measure
sota
Self-organizing Tree Algorithm (SOTA)
plot.sota
Plot Function for a SOTA Object
dunn
Dunn Index
mouse
Mouse Mesenchymal Cells
stability
Stability Measures
getRanksWeights
Extract ranks and weights from clValid object
BHI
Biological Homogeneity Index
clValid-internal
Internal clValid functions