ANTsR (version 0.3.3)

perfusionregression: Perfusion Regression

Description

Estimate CBF using standard regression and optionally robust regression.

Usage

perfusionregression(mask_img, mat, xideal, nuis = NA, dorobust = 0, skip = 20, selectionValsForRegweights = NULL, useBayesian = 0)

Arguments

mask_img

Mask image selects the voxels where CBF will be estimated. Voxels corresponding to logical FALSE are not computed.

mat

Matrix with a column for every time-series voxel. Number of rows equals the number of time units in the series.

xideal

1D time-series signal to be used a ideal or model for regression.

nuis

Nuisance parameters obtained from '.get_perfusion_predictors'.

dorobust

Real value in interval from 0 to 1. If greater than 0, then robust regression will be performed. A typical value would be 0.95 i.e. use voxels with 95 percent confidence.

skip

skip / stride over this number of voxels to increase speed

selectionValsForRegweights

scalar function to guide parameter est.

useBayesian

if greater than zero, use a bayesian prior w/this weight

Value

Success -- An object of type 'antsImage' containing the CBF estimate for voxels corresponding to the mask input

Examples

## Not run: 
# #
# # cbf <- perfusionregression( mask_img, mat, xideal , nuis )
# ## End(Not run)