ANTsR (version 0.4.0)

euler: Euler Character

Description

Mostly an for internal use in conjunction with resels. Calculates the euler characteristic at a threshold level.

Usage

euler(u, df, fieldType)

Arguments

u

statistical value (typically the maxima of a cluster or statistical field)

df

degrees of freedom expressed as df = c(degrees of interest, degrees of error)

fieldType

• T: T-field

• F: F-field

• X: Chi-square field'

• Z: Gaussian field

Value

A vector of estimated euler characteristics for dimensions 0:D

References

Worlsey K.J., (1996) A Unified Statistical Approach for Determining Significant Signals in Images of Cerebral Activation.

See Also

rftPval, resels

Examples

# NOT RUN {
mask <- getMask(antsImageRead(getANTsRData('mni')))
myresels <- resels(mask, c(1, 1, 1))
# pretend these results are from a t-statistical field fitted with 10 df to
# find a peak value. 
df <- c(1, 10) # made up degrees of freedom
ec <- euler(4, df, fieldType = "T") # peak value is 4
ez <- euler(3, df, fieldType = "T") # we thresholded at 3
# uncorrected peak-level p-value
pvox <- sum(ec * myresels)/sum(ez * myresels)

# }