ANTsR (version 0.4.0)

ripmmarcBasisImage: Generate an antsImage from ripmmarc basis data

Description

This function converts a vectorized image patch back into an antsImage such that it may be displayed in its extrinsic dimensionality.

Usage

ripmmarcBasisImage(canonicalFrame, patchBasisVector, eps = 1e-12)

Arguments

canonicalFrame

canonical frame image generated by ripmmarc

patchBasisVector

the basis vector to convert to image space

eps

small value threshold to help generate mask from canonicalFrame

Value

antsImage

Examples

# NOT RUN {
img <- antsImageRead( getANTsRData( "r16" ) )
msk <- thresholdImage( img, quantile( img[ img > 0 ] )[1], max( img ) )
ripped <- ripmmarc( img, msk, patchRadius=3, patchSamples=2000, patchVarEx=5)
bimg = ripmmarcBasisImage( ripped$canonicalFrame, ripped$basisMat[4,] )

# }