ANTsR (version 0.7.2.0)

powers_areal_mni_itk: powers_areal_mni_itk

Description

A data frame providing coordinates for the nodes identified by Powers at al. Coordinates have been modified from nifti space to ITK space

Usage

data(powers_areal_mni_itk)

Format

A data frame listing the following variables.

x

x coordinate

y

y coordinate

z

z coordinate

ROI

unique integer for each node

SystemLabel

unique integer for each system

SystemName

unique name for each system

Color

name of color for system

r

red value for system

g

green value for system

b

blue value for system

Anatomy

anatomical location as determined by OASIS labeling

Lobe

lobe location of node

Brodmann

Broadmann area number

AAL

AAL region label

References

http://www.nil.wustl.edu/labs/petersen/Resources.html

Examples

# NOT RUN {
data(powers_areal_mni_itk)
# }
# NOT RUN {
fixed <- antsImageRead( getANTsRData("ch2") )
moving <- antsImageRead( getANTsRData("mni") )
mytx <- antsRegistration( fixed=fixed, moving=moving, typeofTransform = c("SyN") )
data( "powers_areal_mni_itk", package = "ANTsR", envir = environment() )
coords = powers_areal_mni_itk[,1:3]
ch2reg   = antsRegistration( fixed, moving, typeofTransform = "SyN" )
coordsw <- antsApplyTransformsToPoints( dim=3, points=coords,
       transformlist=ch2reg$fwdtransforms, whichtoinvert=c(FALSE,FALSE) )
ptrd = 3
powersLabels = makePointsImage( coordsw, moving, radius = pard )
plot( moving, powersLabels, axis=3, nslices=30 )
# }