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APFr (version 1.0.2)

Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation

Description

Implements a multiple testing approach to the choice of a threshold gamma on the p-values using the Average Power Function (APF) and Bayes False Discovery Rate (FDR) robust estimation. Function apf_fdr() estimates both quantities from either raw data or p-values. Function apf_plot() produces smooth graphs and tables of the relevant results. Details of the methods can be found in Quatto P, Margaritella N, et al. (2019) .

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Version

Install

install.packages('APFr')

Monthly Downloads

222

Version

1.0.2

License

GPL-3

Maintainer

Nicol<c3><b2> Margaritella

Last Published

June 18th, 2019

Functions in APFr (1.0.2)

Ex2

Example 2
Ex1

Example dataset 1
apf_fdr

Implementation of APF and FDR robust estimation
apf_plot

Generate smooth graphs for the APF and FDR estimates