AllelicImbalance (version 1.10.2)

ASEset-filters: genotype filter methods

Description

useful genotype filters

Usage

hetFilt(x, ...)
"hetFilt"(x, source = "genotype", ...)

Arguments

x

ASEset object

...

internal param

source

'genotype' or 'alleleCounts'

Details

hetFilt returns TRUE if the samples is heterozygote, based on stored genotype information present in the phase data.

Examples

#load example data
data(ASEset)
a <- ASEset

genotype(a) <- inferGenotypes(a)
hets <- hetFilt(a)