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BDgraph (version 2.25)
Bayesian Graph Selection Based on Birth-Death MCMC Approach
Description
Provides statistical tools for Bayesian structure learning in undirected graphical models with either continuous or discrete variables.
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Install
install.packages('BDgraph')
Monthly Downloads
2,168
Version
2.25
License
GPL (>= 3)
Maintainer
Abdolreza Mohammadi
Last Published
November 19th, 2015
Functions in BDgraph (2.25)
Search all functions
print.bdgraph
Print function for
S3
class
"bdgraph"
CellSignal
A flow cytometry dataset
bdgraph
Search algorithm in graphical models
gnorm
Log of the normalizing constant of G-Wishart distribution
rgwish
Sampling from G-Wishart distribution
compare
Comparing the results
plot.bdgraph
Plot function for
S3
class
"bdgraph"
plotcoda
Convergence plot
BDgraph-internal
Internal BDgraph functions and datasets
bdgraph.sim
Synthetic graph data generator
rwish
Sampling from Wishart distribution
geneExpression
Human gene expression dataset
select
Graph selection
BDgraph-package
Bayesian Structure Learning in Graphical Models
plinks
Estimated posterior link probabilities
plot.sim
Plot function for
S3
class
"sim"
pgraph
Posterior probabilities of the graphs
print.sim
Print function for
S3
class
"sim"
surveyData
Labor force survey data
plotroc
ROC plot
summary.bdgraph
Summary function for
S3
class
"bdgraph"
traceplot
Trace plot of graph size
bdgraph.npn
Nonparametric transfer