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BDgraph (version 2.33)
Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
Description
Provides statistical tools for Bayesian structure learning in undirected graphical models with both continuous and discrete variables.
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Install
install.packages('BDgraph')
Monthly Downloads
2,168
Version
2.33
License
GPL (>= 2)
Maintainer
Abdolreza Mohammadi
Last Published
February 12th, 2017
Functions in BDgraph (2.33)
Search all functions
plotcoda
Convergence plot
plot.bdgraph
Plot function for
BDgraph-internal
Internal BDgraph functions and datasets
geneExpression
Human gene expression dataset
BDgraph-package
Bayesian Structure Learning in Graphical Models
bdgraph
Search algorithm in graphical models
plot.sim
Plot function for
bdgraph.ts
Search algorithm in time series graphical models
compare
Comparing the results
bdgraph.sim
Synthetic graph data generator
traceplot
Trace plot of graph size
surveyData
Labor force survey data
print.bdgraph
Print function for
plotroc
ROC plot
print.sim
Print function for
summary.bdgraph
Summary function for
pgraph
Posterior probabilities of the graphs
gnorm
Log of the normalizing constant of G-Wishart distribution
bdgraph.npn
Nonparametric transfer
rgcwish
Sampling from complex G-Wishart distribution
rgwish
Sampling from G-Wishart distribution
plinks
Estimated posterior link probabilities
rcwish
Sampling from Complex Wishart distribution
rwish
Sampling from Wishart distribution
select
Graph selection