cci.pval.list

<p>List of 2x2 matrices to apply the cci.pvalue function. List output of TableMaker.</p>

<p>Variation of the cci.pvalue function</p>

Data sets and functions for chi-squared Hardy-Weinberg and case-control association tests of highly polymorphic genetic data [e.g., human leukocyte antigen (HLA) data]. Performs association tests at multiple levels of polymorphism (haplotype, locus and HLA amino-acids) as described in Pappas DJ, Marin W, Hollenbach JA, Mack SJ (2016) <doi:10.1016/j.humimm.2015.12.006>. Combines rare variants to a common class to account for sparse cells in tables as described by Hollenbach JA, Mack SJ, Thomson G, Gourraud PA (2012) <doi:10.1007/978-1-61779-842-9_14>.

Steve Mack

cci.pval.list: Case Control Odds Ratio Calculation from Epicalc list variation

Description

Usage

Arguments