make2x2

caseexp

controlex

casenonex

controlnonex

<p>make2x2 function port epicalc version 2.15.1.0 (Virasakdi Chongsuvivatwong, 2012)</p>

Data sets and functions for chi-squared Hardy-Weinberg and case-control association tests of highly polymorphic genetic data [e.g., human leukocyte antigen (HLA) data]. Performs association tests at multiple levels of polymorphism (haplotype, locus and HLA amino-acids) as described in Pappas DJ, Marin W, Hollenbach JA, Mack SJ (2016) <doi:10.1016/j.humimm.2015.12.006>. Combines rare variants to a common class to account for sparse cells in tables as described by Hollenbach JA, Mack SJ, Thomson G, Gourraud PA (2012) <doi:10.1007/978-1-61779-842-9_14>.

Steven Mack

BIGDAWG

Case-Control Analysis of Multi-Allelic Loci

make2x2 function

Creation of a 2x2 table using the indicated orientation. — make2x2

Creation of a 2x2 table using the indicated orientation.

make2x2: Creation of a 2x2 table using the indicated orientation.

Description

Usage

Arguments