Bac-Constructor

model

A character vector indicating name of substance which is the chemotaxis attractant. Empty character vector if no chemotaxis.

chem

Arguments of <code><a rd-options="" href="/link/Organism?package=BacArena&version=1.8.2" data-mini-rdoc="BacArena::Organism">Organism</a></code>

Constructor of the S4 class <code><a rd-options="" href="/link/Bac-class?package=BacArena&version=1.8.2" data-mini-rdoc="BacArena::Bac-class">Bac-class</a></code>

Can be used for simulation of organisms living in
communities (Bauer and Zimmermann (2017) <doi:10.1371/journal.pcbi.1005544>).
Each organism is represented individually and genome scale
metabolic models determine the uptake and release of compounds. Biological
processes such as movement, diffusion, chemotaxis and kinetics are available
along with data analysis techniques.

Johannes Zimmermann

BacArena

Modeling Framework for Cellular Communities in their
Environments

Eugen Bauer

Bac-Constructor function

Arguments of <code><a rd-options='' href='Organism'>Organism</a></code>

Constructor of the S4 class <code><a rd-options='' href='Bac-class'>Bac-class</a></code>

Constructor of the S4 class <code><a rd-options='' href='Bac-class'>Bac-class</a></code> — Bac-Constructor

Constructor of the S4 class <code><a rd-options='' href='Bac-class'>Bac-class</a></code>

Constructor of the S4 class <code><a rd-options="" href="/link/Bac-class?package=BacArena&version=1.8.2" data-mini-rdoc="BacArena::Bac-class">Bac-class</a></code>

Bac-Constructor: Constructor of the S4 class `Bac-class`

Description

Usage

Arguments

Value