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BacArena (version 1.8.2)

findFeeding: Function for investigation of feeding between phenotypes

Description

The generic function findFeeding

Usage

findFeeding(
  object,
  dict = NULL,
  tcut = 5,
  scut = NULL,
  org_dict = NULL,
  legendpos = "topleft",
  lwd = 1
)
# S4 method for Eval
findFeeding(
  object,
  dict = NULL,
  tcut = 5,
  scut = NULL,
  org_dict = NULL,
  legendpos = "topleft",
  lwd = 1
)

Arguments

object

An object of class Eval.

dict

List defining new substance names. List entries are intepreted as old names and the list names as the new ones.

tcut

Integer giving the minimal mutual occurence ot be considered (dismiss very seldom feedings)

scut

substance names which should be ignored

org_dict

A named list/vector with names that should replace (eg. unreadable) IDs

legendpos

A character variable declaring the position of the legend

lwd

Line thickness scale in graph

Value

Graph (igraph)